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Series GSE14923 Query DataSets for GSE14923
Status Public on Apr 01, 2009
Title The host transcriptome remains unaltered during the establishment of coral-algal symbioses
Organisms Acropora palmata; Orbicella faveolata
Experiment type Expression profiling by array
Summary Coral reefs are based on the symbiotic relationship between corals and photosynthetic dinoflagellates of the genus Symbiodinium. We followed gene expression of coral larvae of Acropora palmata and Montastraea faveolata after exposure to Symbiodinium strains that differed in their ability to establish symbioses. We show that the coral host transcriptome remains almost unchanged during infection by competent symbionts, but is massively altered by symbionts that fail to establish symbioses. Our data suggest that successful coral-algal symbioses depend mainly on the symbionts' ability to enter the host in a stealth manner rather than a more active response from the coral host.
 
Overall design Acropora palmata Samples: Three biological replicates of pooled larvae from each species and condition (i.e. untreated control, inoculated with competent Symbiodinium strain, inoculated with incompetent Symbiodinium strain) for both time points were hybridized against a pooled reference. Pooled references were constructed by combining equal amounts of aRNA from all control samples from A. palmata. References were labeled with Cy3, samples with Cy5.

Montastraea faveolata Samples: Three biological replicates of pooled larvae from each species and condition (i.e. untreated control, inoculated with competent Symbiodinium strain, inoculated with incompetent Symbiodinium strain) for both time points were hybridized against a pooled reference. Pooled references were constructed by combining equal amounts of aRNA from all control samples from M. faveolata. References were labeled with Cy3, samples with Cy5.

Symbiodinium sp. CassKB8: competent strain
Symbiodinium sp. EL1: incompetent strain
Symbiodinium sp. Mf1.05b: competent strain
 
Contributor(s) Voolstra CR, Schwarz JA, Schnetzer J, Sunagawa S, DeSalvo MK, Coffroth M, Szmant AM, Medina M, Voolstra CR, Schwarz JA, Schnetzer J, Sunagawa S, DeSalvo MK, Coffroth M, Szmant AM, Medina M
Citation(s) 19317843
Submission date Feb 20, 2009
Last update date Sep 20, 2012
Contact name Christian Robert Voolstra
E-mail(s) [email protected]
URL http://faculty.kaust.edu.sa/sites/christianvoolstra/Pages/home.aspx
Organization name King Abdullah University of Science and Technology
Street address Red Sea Research Center
City Thuwal
ZIP/Postal code 23955
Country Saudi Arabia
 
Platforms (2)
GPL8208 UCMerced_Apal_v3
GPL8215 UCMerced_Mfav_v3
Samples (36)
GSM372665 apal early con 1
GSM372666 apal early con 2
GSM372667 apal early con 3
Relations
BioProject PRJNA111911

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE14923_RAW.tar 4.8 Mb (http)(custom) TAR (of MEV)
Processed data included within Sample table

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