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Series GSE17489 Query DataSets for GSE17489
Status Public on Sep 01, 2009
Title Expression data in WT and ES cells overexpressing Satb2
Organism Mus musculus
Experiment type Expression profiling by array
Summary Satb1 and Satb2 are regulators of higher order chromatin in T cells and osteoblasts repectively. We were interested if Satb1 and Satb2 play a role in the regulation of gene expression in ES cells.
ES cells which can inducibly express Satb1 or Satb2 were generated using the tet-ON system. In this experiment, we compared gene expression in uninduced cells to that in cells which had been induced for 24h to express Satb2 ectopcially at very high levels.
 
Overall design Cells were cultured, passaged every 3 days. After trypsinisation cells were grown for 1 day in the presence of LIF only, after 1 day a set of cultures was induced by the addition of DOX to the culture medium. Induction took place for 24h, RNA was generated 48h after passaging.
 
Contributor(s) Savarese F, Engelke R, Nechanitzky R, Grosschedl R
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Submission date Aug 03, 2009
Last update date Mar 04, 2019
Contact name Rudolf Engelke
E-mail(s) [email protected]
Phone +49 761 5108 751
Organization name Max Planck Institute of Immunobiology
Street address Stuebeweg 51
City Freiburg
ZIP/Postal code 79108
Country Germany
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (5)
GSM436117 tetO-Satb2 #1
GSM436118 tetO-Satb2 #2
GSM436119 tetO-Satb2 #1 +DOX
This SubSeries is part of SuperSeries:
GSE17490 Role of Satb1 and Satb2 in embryonic stem cells
Relations
BioProject PRJNA123623

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE17489_RAW.tar 18.9 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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