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Series GSE182317 Query DataSets for GSE182317
Status Public on Apr 29, 2023
Title Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Genome variation profiling by genome tiling array
Methylation profiling by array
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
 
Citation(s) 37060567
Submission date Aug 17, 2021
Last update date Apr 30, 2023
Contact name Rico Hagelaar
E-mail(s) [email protected]
Organization name Princess Maxima Center
Street address Heidelberglaan 25
City Utrecht
ZIP/Postal code 3584CS
Country Netherlands
 
Platforms (5)
GPL2879 Agilent-013282 Human Genome CGH Microarray 44B (Feature number version)
GPL4093 Agilent-014698 Human Genome CGH Microarray 105A (G4412A)
GPL9777 Agilent-021850 SurePrint G3 Human CGH Microarray (Feature Number version)
Samples (171)
GSM5510505 CTCF pull down for PDX sample 634
GSM5510506 CTCF pull down for PDX sample 719
GSM5510507 CTCF pull down for PDX sample 1179
This SuperSeries is composed of the following SubSeries:
GSE181759 Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia [CTCF_ChIPseq]
GSE182312 Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia [Array CGH]
GSE182313 Elevated enhancer-oncogene contacts and higher oncogene expression levels by recurrent CTCF inactivating mutations in acute T cell leukemia [BeadChip Methylation]
Relations
BioProject PRJNA755731

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE182317_RAW.tar 8.7 Gb (http)(custom) TAR (of HIC, IDAT, NARROWPEAK, RDS, TXT)
SRA Run SelectorHelp

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