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Series GSE184059 Query DataSets for GSE184059
Status Public on Mar 29, 2023
Title The cooperation between HAND2 and MYCN on DNA binding [HAND2-overexpression_ChIPseq]
Organism Homo sapiens
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary HAND2 assists MYCN bind to DNA.
 
Overall design In the HAND2 stably transfected IMR32 cells (IMR32tetHAND2), HAND2 expression is Doxcycline (Dox) inducible. The IMR32tetHAND2 cells were treated with or without Dox for 6 hr or 36 hr, and ChIP seq was performed using anti-HAND2 antibody and anti-MYCN antibody.
 
Contributor(s) Xu M, hui Z, Thiele CJ
Citation(s) 36598365, 37781575
Submission date Sep 13, 2021
Last update date Oct 19, 2023
Contact name Jack Shern
Organization name NCI
Lab POB
Street address 10 Center drive
City bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL18573 Illumina NextSeq 500 (Homo sapiens)
Samples (12)
GSM5576983 IMR32tetHAND2_Ctrl_Input_36h
GSM5576984 IMR32tetHAND2_Dox_Input_36h
GSM5576985 IMR32tetHAND2_Ctrl_MYCN_36h
This SubSeries is part of SuperSeries:
GSE183641 Analysis of HAND2 and MYCN
Relations
BioProject PRJNA762920
SRA SRP336878

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE184059_RAW.tar 1.9 Gb (http)(custom) TAR (of BW)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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