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Series GSE18954 Query DataSets for GSE18954
Status Public on Jan 21, 2010
Title Effects of IGF 1 on CCL-171 fibroblasts
Organism Homo sapiens
Experiment type Expression profiling by array
Summary To characterize the effects of IGF 1 on CCL171 cells, we cultured pre-starved CCL 171 fibroblasts with or without 50ng/ml IGF 1 for 24 h. We then profiled gene expression changes using Human Exonic Evidence Based Oligonucleotide (HEEBO) microarrays. After stimulation, total RNA was extracted and amplified using a modified Eberwine procedure. The amplified RNA was labeled with the fluorescent dye Cy5 and pooled with Cy3 labeled reference RNA, and then the pooled RNA was hybridized onto HEEBO microarrays. After hybridization and washing, arrays were scanned on a fluorescent microscope scanner.
 
Overall design An all pairs experiment design type is where all labeled extracts are compared to every other labeled extract.
 
Contributor(s) Rajski M
Citation(s) 20051100
Submission date Nov 09, 2009
Last update date Mar 21, 2012
Contact name Michal Rajski
E-mail(s) [email protected]
Organization name University of Zurich
Department Institute of Physiology
Lab 23K86
Street address Winterthurerstrasse 190
City Zurich
ZIP/Postal code CH - 8057
Country Switzerland
 
Platforms (1)
GPL9550 SMD Print_1308 Homo sapiens
Samples (4)
GSM469372 CCL171 24h culture slide 1
GSM469373 CCL171 + IGF I 24h culture slide 2
GSM469374 CCL171 + IGF I 24h culture slide 1
This SubSeries is part of SuperSeries:
GSE18955 Effects of IGF 1 on primary breast fibroblasts, MCF-7 breast cancer cells and CCL-171 fibroblasts
Relations
BioProject PRJNA123883

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE18954_RAW.tar 4.2 Mb (http)(custom) TAR
Processed data included within Sample table

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