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Series GSE22196 Query DataSets for GSE22196
Status Public on Jul 01, 2010
Title Skin gamma delta T cells in Obesity
Organism Mus musculus
Experiment type Expression profiling by array
Summary Epithelial cells provide an initial line of defense against damage and pathogens in barrier tissues such as the skin; however this balance is disrupted in obesity and metabolic disease. Skin gamma delta T cells recognize epithelial damage and release cytokines and growth factors that facilitate wound repair. To determine the impact of obesity and metabolic disease on skin gamma delta T cells, we isolated skin gamma delta T cells from 10-week old C57BLKS/J lean db/+ and obese db/db animals for further study. Due to a deficiency in the leptin receptor (db), homozygous db/db animals do not process satiety signals, continually eat and develop severe obesity and metabolic disease. Skin gamma delta T cells isolated from these animals were compared for changes in mRNA expression using microarray. We have determined that obesity and metabolic disease negatively impacts homeostasis and functionality of skin gamma delta T cells, rendering host defense mechanisms vulnerable to injury and infection.
 
Overall design The goal of this experiment was to compare skin gamma delta T cells in a control mouse to skin gamma delta T cells isolated from an obese mouse to see what homeostatic changes occur in obesity and metabolic disease. gamma delta T cells were isolated from two 10-week old lean db/+ control and two 10-week old obese db/db animals for comparison. We wanted to determine which growth factors and signaling pathways were altered in skin gamma delta T cells residing in the obese environment.
 
Contributor(s) Jameson JM, Taylor KR
Citation(s) 20625397
Submission date Jun 08, 2010
Last update date Mar 04, 2019
Contact name Steven Head
E-mail(s) [email protected]
Phone 858 784-2263
Organization name The Scripps Research Institute
Street address 10550 N Torrey Pines Rd
City La Jolla
State/province CA
ZIP/Postal code 92037
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (4)
GSM552537 skin gamma delta T-cell from control mouse replicate #1
GSM552538 skin gamma delta T-cell from control mouse replicate #2
GSM552539 skin gamma delta T-cell from obese mouse replicate #1
Relations
BioProject PRJNA128797

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22196_RAW.tar 15.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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