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Series GSE22416 Query DataSets for GSE22416
Status Public on Jun 07, 2011
Title Expression data from ileum of inducible intestine-specific GATA6 knockout mice
Organism Mus musculus
Experiment type Expression profiling by array
Summary GATA6 is a transcription factor involved in the differentiation of intestinal epithelial cells into differentiated absorptive epithelial cells.
GATA6 is expressed in all segments of the small intestine. We examined the impact of deleting GATA6 from intestinal epithelial cells of the adult ileum
 
Overall design 6-8 week old Villin-CreERT2 mice or Villin-CreERT2 mice crossed to GATA6 flox/flox mice were treated with a single injection of tamoxifen. (100 mg/ml) for 5 consecutive days. 28 days later the ileum was dissected and RNA prepared from the whole ileal segment using the RNAeasy method with DNAse treatment. Three individual mice were examined in each of the control and GATA6 KO groups.
 
Contributor(s) Beuling E, Baffour-Awauh NA, Stapleton KA, Noah TK, Shroyer NF, Duncan SA, Fleet JC, Krasinski SD
Citation(s) 21262227
Submission date Jun 17, 2010
Last update date Mar 04, 2019
Contact name James C Fleet
E-mail(s) [email protected]
Organization name University of Texas at Austin
Department Nutritional Sciences
Street address 1400 Barbara Jordan Blvd
City Austin
State/province TX
ZIP/Postal code 78732
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (6)
GSM557234 Control ileum, replicate 1
GSM557235 Control ileum, replicate 2
GSM557236 Control ileum, replicate 3
Relations
BioProject PRJNA128561

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE22416_RAW.tar 20.4 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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