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Series GSE23687 Query DataSets for GSE23687
Status Public on Sep 27, 2010
Title Expression data from SPARKS CHARMS JIA cohort
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Gene expression on peripheral blood mononuclear cells (PBMC) from SPARKS CHARMS juvenile idiopathic arthritis (JIA) cohort pre and post methotrexate therapy. This is the first study to our knowledge, to evaluate gene expression profiles in children with JIA before and after MTX, and to analyze genetic variation in differentially expressed genes. We have identified a gene, which may contribute to genetic variability in MTX response in JIA.
 
Overall design PBMC were isolated from blood samples taken from 11 patients with JIA pre methotrexate therapy and at 6 months into therapy
 
Contributor(s) Moncrieffe H, Wedderburn LR
Citation(s) 20827233
Submission date Aug 18, 2010
Last update date Mar 25, 2019
Contact name Lucy R Wedderburn
Organization name Institute of Child Health, UCL
Department Rheumatology
Street address 30 Guilford Street
City London
ZIP/Postal code WC1N 1EH
Country United Kingdom
 
Platforms (1)
GPL570 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array
Samples (22)
GSM580950 JIA PBMC Pre treatment A235_L003
GSM580951 JIA PBMC Post treatment A235_L003(2)
GSM580952 JIA PBMC Pre treatment A235_L009
Relations
BioProject PRJNA130909

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE23687_RAW.tar 103.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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