|
| Status |
Public on Sep 17, 2011 |
| Title |
Gene expression and H3K9ac genome-wide maps following HDAC inhibition in mouse ES cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Citation(s) |
21849501 |
| |
| Submission date |
Sep 02, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Eran Meshorer |
| E-mail(s) |
[email protected]
|
| Phone |
+972-2-6585161
|
| Fax |
+972-2-6586073
|
| URL |
http://meshorerlab.huji.ac.il/
|
| Organization name |
The Hebrew University of Jerusalem
|
| Department |
Genetics
|
| Lab |
Stem cell chromatin
|
| Street address |
Edmond J. Safra campus
|
| City |
Jerusalem |
| ZIP/Postal code |
91904 |
| Country |
Israel |
| |
|
| Platforms (2) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL9318 |
AB SOLiD System 3.0 (Mus musculus) |
|
| Samples (14)
|
| GSM590262 |
VPA 2, 16hrs |
| GSM590263 |
NaBu 1, 16hrs |
| GSM590264 |
NaBu 2, 16hrs |
| GSM590265 |
Control 1, 4hrs |
| GSM590266 |
Control 2, 4hrs |
| GSM590267 |
VPA 1, 4hrs |
| GSM590268 |
VPA 2, 4hrs |
| GSM595515 |
Control, ChIP-seq |
| GSM595516 |
VPA, 4 hrs, ChIP-seq |
| GSM595517 |
VPA, 16 hrs, ChIP-seq |
| GSM595518 |
Input, ChIP-seq |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE23956 |
Gene expression profiles of E14 ESCs treated with low levels of HDAC inhibitors for 16 hrs |
| GSE23957 |
Gene expression profiles of E14 ESCs treated with low levels of the HDAC inhibitor VPA for 4 hrs |
| GSE24211 |
Genome-wide H3K9 acetylation state before and after VPA treatment |
|
| Relations |
| BioProject |
PRJNA130381 |
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