|
| Status |
Public on Oct 20, 2010 |
| Title |
DNA methylation data from a separate set of human iPS cells and fibroblasts, and ES cells |
| Organism |
Homo sapiens |
| Experiment type |
Methylation profiling by genome tiling array
|
| Summary |
We used custom Nimblegen microarrays to determine the DNA methylation profiles of iPS cells, ES cells, and fibroblasts.
|
| |
|
| Overall design |
We isolated genomic DNA from iPS cells, ES cells, and fibroblasts and hybridized to custom-designed Nimblegen microarrays (CHARM arrays).
|
| |
|
| Contributor(s) |
Doi A, Park I, Wen B, Murakami P, Daley GQ, Feinberg AP |
| Citation(s) |
19881528 |
| |
| Submission date |
Oct 20, 2010 |
| Last update date |
Mar 22, 2012 |
| Contact name |
Akiko Doi |
| E-mail(s) |
[email protected]
|
| Phone |
410-614-3478
|
| Organization name |
Johns Hopkins University School of Medicine
|
| Department |
Medicine
|
| Street address |
855 N Wolfe St, Rangos 580
|
| City |
Baltimore |
| State/province |
MD |
| ZIP/Postal code |
21205 |
| Country |
USA |
| |
|
| Platforms (1) |
|
| Samples (8)
|
| GSM610948 |
fibroblast 1 input, methyl-depleted [JDM] |
| GSM610949 |
iPS 1 input, methyl-depleted [JDM.iPS10] |
| GSM610950 |
iPS 2 input, methyl-depleted [ADA-iPS3] |
| GSM610951 |
fibroblast 2 input, methyl-depleted [hFib2] |
| GSM610952 |
iPS 3 input, methyl-depleted [hFib2-iPS5] |
| GSM610953 |
ES 1 input, methyl-depleted [BGO1] |
| GSM610954 |
ES 2 input, methyl-depleted [BGO3] |
| GSM610955 |
ES 3 input, methyl-depleted [H9] |
|
| This SubSeries is part of SuperSeries: |
| GSE18111 |
Human iPS cells and fibroblasts |
|
| Relations |
| BioProject |
PRJNA132201 |
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