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Series GSE257921 Query DataSets for GSE257921
Status Public on Feb 27, 2024
Title TF ChIP-seq from whole organism (ENCSR395BWO)
Project modENCODE
Organism Caenorhabditis elegans
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Summary ChIP-seq against eGFP-snpc-4 in young adult worms.

For data usage terms and conditions, please refer to http://www.genome.gov/27528022 and http://www.genome.gov/Pages/Research/ENCODE/ENCODE_Data_Use_Policy_for_External_Users_03-07-14.pdf
 
Overall design https://www.encodeproject.org/ENCSR395BWO/
 
Citation(s) 22955616
BioProject PRJNA63463
Submission date Feb 25, 2024
Last update date Sep 02, 2024
Contact name ENCODE DCC
E-mail(s) [email protected]
Organization name ENCODE DCC
Street address 300 Pasteur Dr
City Stanford
State/province CA
ZIP/Postal code 94305-5120
Country USA
 
Platforms (1)
GPL13776 Illumina Genome Analyzer IIx (Caenorhabditis elegans)
Samples (2)
GSM8108851 TF ChIP-seq from whole organism (ENCLB209GKN)
GSM8108852 TF ChIP-seq from whole organism (ENCLB137MDI)
Relations
Reanalyzed by GSE276166

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE257921_ENCFF078BGK_optimal_IDR_thresholded_peaks_ce10.bed.gz 35.2 Kb (ftp)(http) BED
GSE257921_ENCFF264KRS_peaks_and_background_as_input_for_IDR_ce10.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257921_ENCFF308WLR_signal_of_unique_reads_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257921_ENCFF441INW_signal_of_unique_reads_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257921_ENCFF472MLV_read-depth_normalized_signal_ce10.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257921_ENCFF478BQS_optimal_IDR_thresholded_peaks_ce10.bigBed 112.6 Kb (ftp)(http) BIGBED
GSE257921_ENCFF494HUS_control_normalized_signal_ce11.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257921_ENCFF518UAB_optimal_IDR_thresholded_peaks_ce11.bed.gz 34.2 Kb (ftp)(http) BED
GSE257921_ENCFF703DYO_peaks_and_background_as_input_for_IDR_ce10.bed.gz 750.5 Kb (ftp)(http) BED
GSE257921_ENCFF748PPR_peaks_and_background_as_input_for_IDR_ce11.bigBed 1.2 Mb (ftp)(http) BIGBED
GSE257921_ENCFF800UFJ_optimal_IDR_thresholded_peaks_ce11.bigBed 111.6 Kb (ftp)(http) BIGBED
GSE257921_ENCFF855PZC_peaks_and_background_as_input_for_IDR_ce11.bed.gz 751.5 Kb (ftp)(http) BED
GSE257921_ENCFF895JZC_read-depth_normalized_signal_ce11.bigWig 9.6 Mb (ftp)(http) BIGWIG
GSE257921_ENCFF910TLY_control_normalized_signal_ce10.bigWig 9.8 Mb (ftp)(http) BIGWIG
GSE257921_RAW.tar 123.1 Mb (http)(custom) TAR (of BED, BIGBED, BIGWIG, TXT)
Raw data are available in SRA

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