|
| Status |
Public on Mar 05, 2012 |
| Title |
Whole-genome study reveals distinct mechanisms used by p53 to regulate activated and repressed genes in embryonic stem cells |
| Organism |
Mus musculus |
| Experiment type |
Expression profiling by array
Genome binding/occupancy profiling by high throughput sequencing
|
| Summary |
This SuperSeries is composed of the SubSeries listed below.
|
| |
|
| Overall design |
Refer to individual Series
|
| |
|
| Contributor(s) |
Huang J |
| Citation(s) |
22387025 |
| |
| Submission date |
Dec 29, 2010 |
| Last update date |
May 15, 2019 |
| Contact name |
Jing Huang |
| E-mail(s) |
[email protected]
|
| Organization name |
National Cancer Institute
|
| Lab |
Cancer Biology and Genetics
|
| Street address |
37 Convent Dr. 37/3140
|
| City |
Bethesda |
| State/province |
MD |
| ZIP/Postal code |
MD 20892 |
| Country |
USA |
| |
|
| Platforms (2) |
| GPL6246 |
[MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version] |
| GPL9250 |
Illumina Genome Analyzer II (Mus musculus) |
|
| Samples (24)
|
| GSM412778 |
R1E Mock 4 |
| GSM412779 |
R1E Adriamycin 1 |
| GSM412780 |
R1E Adriamycin 2 |
| GSM412781 |
R1E Adriamycin 3 |
| GSM412782 |
R1E Adriamycin 4 |
| GSM412783 |
R1E UV 1 |
| GSM412784 |
R1E UV 2 |
| GSM412785 |
R1E UV 3 |
| GSM412786 |
R1E UV 4 |
| GSM647216 |
mES, p53-/-, Ctr, rep1 |
| GSM647217 |
mES, p53-/-, Ctr, rep2 |
| GSM647218 |
mES, p53-/-, Ctr, rep3 |
| GSM647219 |
mES, p53-/-, Adr, rep1 |
| GSM647220 |
mES, p53-/-, Adr, rep2 |
| GSM647221 |
mES, p53-/-, Adr, rep3 |
| GSM647222 |
Input_seq_untreated |
| GSM647223 |
Input_seq_Adr8h |
| GSM647224 |
p53_ChIP_seq_untreated |
| GSM647225 |
p53_ChIP_seq_Adr8h |
| GSM647226 |
p53S18P_ChIP_seq_untreated |
| GSM647227 |
p53S18P_ChIP_seq_Adr8h |
|
| This SuperSeries is composed of the following SubSeries: |
| GSE26360 |
Genome-wide analysis revealed a crosstalk between p53 and the pluripotent gene networks in mouse embryonic stem cells (expression) |
| GSE26361 |
Genome-wide analysis revealed a crosstalk between p53 and the pluripotent gene networks in mouse embryonic stem cells (ChIP-Seq) |
|
| Relations |
| BioProject |
PRJNA136879 |
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