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Series GSE28449 Query DataSets for GSE28449
Status Public on Apr 08, 2011
Title Expression data from control and LRF-deficient mouse germinal center B cells
Organism Mus musculus
Experiment type Expression profiling by array
Summary B cells are indispensable for humoral immunity, as they ultimately give rise to antibody-secreting plasma cells. During T cell-dependent antibody responses, naive B cells form germinal centers (GCs), a distinct histologic structure found in secondary lymphoid organs. Naive B cells become activated upon interaction with T cells and antigen presenting cells, and begin to rapidly proliferate and form the characteristic GC structure.
To elucidate the overall effect of LRF loss in the GCB cell transcriptome, gene expression microarray analysis of FACS-sorted GCB cells was performed. LRF Flox/+ mb-1 Cre+ mice were used as a control to normalize the potential effects of Cre recombinase, and four RNA samples for each genotype were used for the analysis.
 
Overall design B cell-specific LRF knockout (LRF Flox/Flox mb-1 Cre+) and control (LRF Flox/+ mb-1 Cre+) mice (4 each) were immunized with sheep red blood cells, and GCB cells were FACS-sorted 7 days later.
 
Contributor(s) Sakurai N, Li M, Takahiro M
Citation(s) 21646720
Submission date Apr 07, 2011
Last update date Mar 04, 2019
Contact name Takahiro Maeda
Organization name Beckman Research Institute of the City of Hope
Department Hematopoietic Stem Cell and Leukemia Research
Lab Maeda
Street address 1500E Duarte Rd
City Duarte
State/province CA
ZIP/Postal code 91010
Country USA
 
Platforms (1)
GPL6246 [MoGene-1_0-st] Affymetrix Mouse Gene 1.0 ST Array [transcript (gene) version]
Samples (8)
GSM703148 GCB LRF F/+ mb1-Cre+ #1
GSM703149 GCB LRF F/+ mb1-Cre+ #2
GSM703150 GCB LRF F/+ mb1-Cre+ #3
Relations
BioProject PRJNA139145

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Supplementary file Size Download File type/resource
GSE28449_RAW.tar 35.5 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

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