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| Status |
Public on Apr 27, 2012 |
| Title |
Expression analysis of strains Streptococcus pneumoniae KCTC 5080T, Streptococcus mitis KCTC 3556T, Streptococcus oralis KCTC 13048T, and Streptococcus pseudopneumoniae CCUG 49455T |
| Platform organism |
Streptococcus pneumoniae R6 |
| Sample organisms |
Streptococcus oralis; Streptococcus pneumoniae; Streptococcus mitis; Streptococcus pseudopneumoniae ATCC BAA-960 = CCUG 49455 |
| Experiment type |
Expression profiling by array
|
| Summary |
Investigation of whole genome gene expression level changes in S. pneumoniae KCTC 5080T, S. mitis KCTC 3556T, S. oralis KCTC 13048T, and S. pseudopneumoniae CCUG 49455T. This proves that transcriptional profiling can facilitate in elucidating the genetic distance between closely related strains.
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| Overall design |
A one chip study using total RNA recovered from S. pseudopneumoniae CCUG 49455T with three strain. For the the transcriptome of S. pseudopneumoniae CCUG 49455T was analyzed using the S. pneumoniae R6 microarray platform and compared with those of S. pneumoniae KCTC 5080T, S. mitis KCTC 3556T, and S. oralis KCTC 13048T strains.
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| Contributor(s) |
Park HK, Myung SC, Kim W |
| Citation(s) |
22607240 |
| |
| Submission date |
Apr 24, 2012 |
| Last update date |
Sep 19, 2019 |
| Contact name |
Heekuk Park |
| E-mail(s) |
[email protected]
|
| Phone |
+82 2 822 5685
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| Fax |
+82 2 822 5685
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| Organization name |
Chung-Ang University College of Medicine
|
| Department |
Department of Medical Microbiology
|
| Lab |
Microbiology
|
| Street address |
Heukseok-dong
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| City |
Seoul |
| ZIP/Postal code |
156-756 |
| Country |
South Korea |
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| Platforms (1) |
| GPL15485 |
Streptococcus pneumoniae whole genome expression array |
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| Samples (4)
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| Relations |
| BioProject |
PRJNA162399 |
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