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GEO accession:
Series GSE40653
Query DataSets for GSE40653
Status
Public on Sep 30, 2012
Title
Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs
Organisms
Homo sapiens
;
Mus musculus
Experiment type
Expression profiling by array
Expression profiling by high throughput sequencing
Summary
This SuperSeries is composed of the SubSeries listed below.
Overall design
Refer to individual Series
Citation(s)
23023293
Submission date
Sep 06, 2012
Last update date
May 15, 2019
Contact name
Gene Yeo
E-mail(s)
[email protected]
Organization name
UCSD
Street address
2880 Torrey Pines Scenic Dr. Room 3805/Yeo Lab
City
La Jolla
State/province
CA
ZIP/Postal code
92037
Country
USA
Platforms (4)
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GPL9250
Illumina Genome Analyzer II (Mus musculus)
GPL11154
Illumina HiSeq 2000 (Homo sapiens)
GPL13112
Illumina HiSeq 2000 (Mus musculus)
GPL13185
[mjay] Custom Affymetrix Mouse Exon Junction Array
Samples (34)
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GSM998840
control anti-sense oligo rep1
GSM998841
control anti-sense oligo rep2
GSM998842
control anti-sense oligo rep3
GSM998843
Fus/Tls anti-sense oligo rep1
GSM998844
Fus/Tls anti-sense oligo rep2
GSM998845
Fus/Tls anti-sense oligo rep3
GSM998846
Fus/Tls knockout rep1
GSM998847
Fus/Tls knockout rep2
GSM998848
control knockout rep1
GSM998849
control knockout rep2
GSM998850
control knockout rep3
GSM998871
Mouse CLIPseq Tdp43
GSM998872
Mouse CLIPseq Fus/Tls rep1
GSM998873
Mouse CLIPseq Fus/Tls rep2
GSM998874
Mouse CLIPseq Fus/Tls rep3
GSM998875
Human CLIPseq FUS/TLS
GSM998876
brain RNAseq control-oligo rep1.1
GSM998877
brain RNAseq control-oligo rep1.2
GSM998878
brain RNAseq control-oligo rep2.1
GSM998879
brain RNAseq control-oligo rep2.2
GSM998880
brain RNAseq control-oligo rep2.3
GSM998881
brain RNAseq control-oligo rep3.1
GSM998882
brain RNAseq control-oligo rep3.2
GSM998883
brain RNAseq control-oligo rep3.3
GSM998884
brain RNAseq control-oligo rep4.1
GSM998885
brain RNAseq control-oligo rep4.2
GSM998886
brain RNAseq control-oligo rep4.3
GSM998887
brain RNAseq Fus/Tls-oligo rep1.1
GSM998888
brain RNAseq Fus/Tls-oligo rep1.2
GSM998889
brain RNAseq Fus/Tls-oligo rep2.1
GSM998890
brain RNAseq Fus/Tls-oligo rep2.2
GSM998891
brain RNAseq Fus/Tls-oligo rep3.1
GSM998892
brain RNAseq Fus/Tls-oligo rep4.1
GSM998893
brain RNAseq Fus/Tls-oligo rep4.2
This SuperSeries is composed of the following SubSeries:
GSE40649
Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (microarray)
GSE40651
Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (CLIP-Seq)
GSE40652
Divergent roles of ALS-linked proteins FUS/TLS and TDP-43 intersect in processing long pre-mRNAs (RNA-Seq)
Relations
BioProject
PRJNA174531
Download family
Format
SOFT formatted family file(s)
SOFT
MINiML formatted family file(s)
MINiML
Series Matrix File(s)
TXT
Supplementary file
Size
Download
File type/resource
GSE40653_RAW.tar
4.7 Gb
(http)
(custom)
TAR (of BED, CEL)
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