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Series GSE45444 Query DataSets for GSE45444
Status Public on Mar 26, 2013
Title Computational Analysis of Bacterial RNA-Seq Data
Organism Neisseria gonorrhoeae F62
Experiment type Expression profiling by high throughput sequencing
Summary RNA-seq analysis was carried out on N. gonorrhoeae grown in vitro to verify accuracy of a novel RNA-seq analysis program, Rockhopper
 
Overall design Three replicates of N. gonorrhoeae grown in vitro
 
Contributor(s) McClure R, Tjaden B
Citation(s) 23716638
Submission date Mar 23, 2013
Last update date May 15, 2019
Contact name Brian Tjaden
Organization name Wellesley College
Street address 106 Central Street
City Wellesley
State/province MA
ZIP/Postal code 02481
Country USA
 
Platforms (1)
GPL16863 Illumina Genome Analyzer IIx (Neisseria gonorrhoeae F62)
Samples (3)
GSM1104429 N. gonorrhoeae grown in KSFM Rep 1
GSM1104430 N. gonorrhoeae grown in KSFM Rep 2
GSM1104431 N. gonorrhoeae grown in KSFM Rep 3
Relations
BioProject PRJNA194150
SRA SRP019957

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE45444_NC_002946_operons.txt.gz 5.8 Kb (ftp)(http) TXT
GSE45444_NC_002946_transcripts.txt.gz 38.2 Kb (ftp)(http) TXT
GSE45444_Summary.txt.gz 685 b (ftp)(http) TXT
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

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