NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE47149 Query DataSets for GSE47149
Status Public on May 22, 2013
Title Mutations in GlnA, NifA and NifK enabling photosynthetic growth of Rhodobacter sphaeroides in the absence of CO2 fixation
Platform organism Cereibacter sphaeroides 2.4.1
Sample organism Cereibacter sphaeroides
Experiment type Expression profiling by array
Summary Previously isolated spontaneous mutants of Rhodobacter sphaeroides, which were initially compromised in their ability to assimilate carbon dioxide through the reductive pentose phosphate pathway, were found to exhibit abnormal nitrogenase gene regulation as well as altered patterns of nitrogenase enzymatic activity. The genomes of these strains were studied by whole genome pyrosequencing and whole genome microarray analysis to identify possible loci responsible for the observed phenotypes.
 
Overall design 3 R.sphaeroides strains were grown in matching conditions to reveal strain-specific gene expression
 
Contributor(s) Tabita FR, Gomelsky M, Moskvin O
Citation(s) 24126349
Submission date May 21, 2013
Last update date Apr 26, 2014
Contact name Oleg Moskvin
Organization name University of Wisconsin-Madison
Street address 1220 Capitol Court
City Madison
State/province WI
ZIP/Postal code 53715
Country USA
 
Platforms (1)
GPL162 [uwyRhodo1a] Rhodobacter sphaeroides 2.4.1 GeneChip
Samples (9)
GSM1145747 Strain 16, biological rep1
GSM1145748 Strain 16, biological rep2
GSM1145749 Strain 16, biological rep3
Relations
BioProject PRJNA204303

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE47149_RAW.tar 11.7 Mb (http)(custom) TAR (of CEL)
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap