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Series GSE48854 Query DataSets for GSE48854
Status Public on Dec 31, 2013
Title Transcriptome analysis of Atasf1 mutants in comparison with wild type.
Organism Arabidopsis thaliana
Experiment type Expression profiling by array
Summary ASF1 is a conserved histone chaperone with affinity to histone H3-H4. Arabidopsis thaliana genome encodes two ASF1 homologues, which play redundant roles in S-phase progression and cell proliferation in plant development. Here, in an attempt to obtain the knowledge of ASF1 role in transcriptional regulation, we perform the transcriptome analysis of each asf1 single mutant (Atasf1a and Atasf1b) as well as Atasf1ab double mutant in comparison with wild type (WT).
 
Overall design 12-day-old seedlings of wild-type (WT), each single mutants and double mutant grown in normal growth condition were used for RNA extraction and microarray. Duplicate samples were analyzed.
 
Contributor(s) Zhu Y
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Submission date Jul 14, 2013
Last update date Apr 22, 2015
Contact name Yan Zhu
E-mail(s) [email protected]
Organization name Fudan University, School of life sciences
Department Biochemistry
Street address 2005, Songhu Road
City Shanghai
ZIP/Postal code 200433
Country China
 
Platforms (1)
GPL12621 Agilent-021169 Arabidopsis 4 Oligo Microarray (V4) (Probe Name version)
Samples (8)
GSM1185677 WT_rep1
GSM1185678 WT_rep2
GSM1185679 Atasf1a_rep1
Relations
BioProject PRJNA212006

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE48854_RAW.tar 70.8 Mb (http)(custom) TAR (of TXT)
Processed data included within Sample table

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