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Series GSE6914 Query DataSets for GSE6914
Status Public on Jan 31, 2007
Title Gene expression associated with gemcitabine resistance and its reversal by bexarotene
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Resistance of Calu3 NSCLC cells to the cytotoxic nucleoside analog gemcitabine (2',2'-difluorodeoxycytidine) can be prevented as well as reversed by the rexinoid X receptor selective agonist bexarotene. This study was designed to investigate the changes in gene expression associated with gemcitabine resistance and its reversal by bexarotene. In addition to the parental Calu3 cells and the 10 cycles of treatment of the gemcitabine resistant Calu3 cells with vehicle or bexarotene, analogous treatment paradigms with gemcitabine alone as well as the combination of both compounds have been included as controls. (However, it has to be noted that in the combination treatment, cells that were re-sensitized by bexarotene have largely been removed from the culture before harvest due to the cytotoxic activity of gemcitabine.)
Keywords: cell type comparison, compound effects
 
Overall design From each of the different Calu3 cultures (parental, gemcitabine-resistant treated with vehicle, bexarotene, gemcitabine, or with the gemcitabine/bexarotene combination for 10 cyclesof ten days each) 4 replicate RNA samples were prepared and individually subjected to microarray analysis.
 
Contributor(s) Tooker P, Wan-Ching Y, Prudente R, Hermann T, Sanders J, Valencia J, Luo W
Citation(s) 17483357
Submission date Jan 30, 2007
Last update date Aug 10, 2018
Contact name Thomas Hermann
E-mail(s) [email protected]
Organization name Ligand Pharmaceuticals
Department Molecular Oncology
Street address 10275 Science Center Dr.
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platforms (1)
GPL96 [HG-U133A] Affymetrix Human Genome U133A Array
Samples (20)
GSM159355 Calu3-Parental_1
GSM159356 Calu3-Parental_2
GSM159357 Calu3-Parental_3
Relations
BioProject PRJNA98533

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE6914_RAW.tar 67.0 Mb (http)(custom) TAR (of CEL, EXP)

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