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Series GSE77285 Query DataSets for GSE77285
Status Public on Jun 07, 2016
Title Impact of tRNA-Glu(UUC) and tRNA-Arg(CCG) on mRNA abundance
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Stable expression of tRNA-Glu(UUC) and tRNA-Arg(CCG) followed by transcriptomic profiling to measure transcripts.
 
Overall design Transfer RNA loci chr1.trna5 (Glu-TTC) and chr16.trna1 (Arg-CCG) were stably over-expressed in MDA-MB-231 cells. The cells were then subjected to transcripome profiling in comparison to mock-transfected cells.
 
Contributor(s) Goodarzi H, Nguyen H, Zhang S, Tavazoie SF
Citation(s) 27259150
Submission date Jan 27, 2016
Last update date Aug 13, 2018
Contact name Hani Goodarzi
Organization name UCSF
Department Biochemistry and Biophysics
Street address 600 16th St, GH S312D
City San Francisco
State/province CA
ZIP/Postal code 94158
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (6)
GSM2047269 MDA_tRNA-Arg-OE_r1
GSM2047270 MDA_tRNA-Arg-OE_r2
GSM2047271 MDA_tRNA-Glu-OE_r1
This SubSeries is part of SuperSeries:
GSE77401 Modulated expression of specific tRNA species drives cancer progression
Relations
BioProject PRJNA310009

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE77285_RAW.tar 26.2 Mb (http)(custom) TAR
GSE77285_final_processed_data.txt.gz 461.8 Kb (ftp)(http) TXT
GSE77285_non-normalized.txt.gz 1.1 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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