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Series GSE78152 Query DataSets for GSE78152
Status Public on Feb 23, 2016
Title Derivation, characterization, and neuronal differentiation of integration-free induced pluripotent stem cell lines from Parkinsons disease patients carrying SNCA, LRRK2, PARK2, and GBA mutations
Organism Homo sapiens
Experiment type Expression profiling by array
Summary Analysis of whole genome expression in control and patients with Parkinsons disease iPSC lines. The hypothesis tested in present study was that deficient GBA, SNCA, LRRK2 and PARKIN expression can be used for disease modeling by their affects on multiple pathways. These results provide information on relationship between PD genes and mitochondria related gene expression.
 
Overall design Total RNA obtained from patient iPSC line compare to control iPSC line
 
Contributor(s) Zeng X
Citation(s) 27191603
Submission date Feb 22, 2016
Last update date Aug 13, 2018
Contact name Ying Pei
Organization name Buck Institute
Street address 8001 redwood blvd
City novato
State/province ca
ZIP/Postal code 94945
Country USA
 
Platforms (1)
GPL10558 Illumina HumanHT-12 V4.0 expression beadchip
Samples (8)
GSM2068255 A6 iPSC
GSM2068256 I3 iPSC
GSM2068257 Y9 iPSC
Relations
BioProject PRJNA312783

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE78152_RAW.tar 26.2 Mb (http)(custom) TAR
GSE78152_non-normalized.txt.gz 2.7 Mb (ftp)(http) TXT
GSE78152_normalized.txt.gz 2.7 Mb (ftp)(http) TXT
Processed data included within Sample table
Processed data are available on Series record

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