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| Status |
Public on Feb 24, 2016 |
| Title |
Gene expression-based investigation of a new role for the glyoxylate shunt in contributing to tolerance to oxidative stress. |
| Organism |
Pseudomonas aeruginosa PAO1 |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
Transcriptional profiling in Pseudomonas aeruginosa MPAO1 and its glyoxylate shunt gens transposon insertion mutants (aceA and glcB) was perfomed using microarray analysis with or without 1mM PQ treatment. Based on the gene expression, we investigated role of glyoxylate shunt in P. aeruginosa and found out pathway related with glyoxylate shunt under oxidative stress.
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| Overall design |
We performed a transcriptome anaylsis of WT and glyoxylate shunt knockout mutants(aceA and glcB) with or without 1mM PQ treatment. Two independent microarray analysis were done.
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| Contributor(s) |
Ahn S, Park W |
| Citation(s) |
27036942, 27895125 |
| |
| Submission date |
Feb 23, 2016 |
| Last update date |
Feb 24, 2017 |
| Contact name |
Sungeun Ahn |
| E-mail(s) |
[email protected]
|
| Organization name |
Korea university
|
| Department |
molecular microbiology
|
| Lab |
molecular environmental microbiology Laboratory
|
| Street address |
Anamro
|
| City |
Anam-Dong, Seungbuk-Ku |
| State/province |
Seoul |
| ZIP/Postal code |
02841 |
| Country |
South Korea |
| |
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| Platforms (1) |
| GPL21507 |
Mycroarray Pseudomonas aeruginosa PA01 array |
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| Samples (12)
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| Relations |
| BioProject |
PRJNA312967 |
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