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Sample GSM100463 Query DataSets for GSM100463
Status Public on Jun 07, 2006
Title MPI-011
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-011
Relapse: unk
Age : NA
Sex : NA
Morphologic.diagnosis : aggressive B-NHL.unclassifiable
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 90
CD5.expr. : NA
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : NA
Genetic.Group : MYC.neg
AnnArbor.Stage : NA
Lesions : NA
B.Symptoms : NA
Survival.Status : NA
FollowupTime..months. : NA
Radiotherapy : NA
RITUXIMAB : NA
Response.to.treatment : NA
Chemotherapy : NA
Molecular.Diagnosis : intermediate
GCB.ABC.signature : GCB
Training.Test : Training
core.BL : no
BL.probability : 0.84
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 28, 2010
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.5723677549722
1053_at 9.36926578392945
117_at 7.67151208136595
121_at 9.99225398811528
1255_g_at 6.29907666824616
1294_at 8.3946469396015
1316_at 7.36703019128721
1320_at 6.97767511520975
1405_i_at 9.3496184110711
1431_at 6.47238836337418
1438_at 7.84996220219784
1487_at 8.61230903487457
1494_f_at 7.95390698449681
1598_g_at 9.44411835870225
160020_at 9.04455007337698
1729_at 8.9142974355075
1773_at 7.89683182841077
177_at 7.73242763405075
179_at 10.0198549457275
1861_at 8.08464195684218

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100463.CEL.gz 3.4 Mb (ftp)(http) CEL

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