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Sample GSM100481 Query DataSets for GSM100481
Status Public on Jun 07, 2006
Title MPI-032
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-032
Relapse: unk
Age : 63
Sex : female
Morphologic.diagnosis : atypical BL
CD20.expr. : present
CD10.expr. : present
bcl2.expr. : present
Ki.67.score : 99
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : IG-MYC
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 2
Genetic.Group : MYC.simple
AnnArbor.Stage : I
Lesions : nodal
B.Symptoms : absent
Survival.Status : alive
FollowupTime..months. : 79.3
Radiotherapy : yes
RITUXIMAB : NA
Response.to.treatment : CR
Chemotherapy : ALL-like
Molecular.Diagnosis : mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 1
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.94543590109768
1053_at 8.96953898979797
117_at 7.63127016400022
121_at 9.85130248973638
1255_g_at 6.19624608300888
1294_at 8.14966831458906
1316_at 7.2227583918656
1320_at 6.96028975618033
1405_i_at 7.14098756758298
1431_at 6.1841295135068
1438_at 8.21229600992637
1487_at 8.33933107414403
1494_f_at 8.05778982292109
1598_g_at 9.35024112042912
160020_at 8.83240129792377
1729_at 8.18660681446102
1773_at 7.67880381413892
177_at 7.23672634457524
179_at 9.99033727581865
1861_at 7.70326713465852

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100481.CEL.gz 3.5 Mb (ftp)(http) CEL

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