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Sample GSM100521 Query DataSets for GSM100521
Status Public on Jun 07, 2006
Title MPI-082
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-082
Relapse: no
Age : 4
Sex : male
Morphologic.diagnosis : atypical BL
CD20.expr. : present
CD10.expr. : present
bcl2.expr. : absent
Ki.67.score : 90
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : IG-MYC
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 2
Genetic.Group : MYC.simple
AnnArbor.Stage : III
Lesions : extranodal
B.Symptoms : present
Survival.Status : alive
FollowupTime..months. : 39.8
Radiotherapy : no
RITUXIMAB : no
Response.to.treatment : CRu
Chemotherapy : ALL-like
Molecular.Diagnosis : mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 1
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.89567419661797
1053_at 9.20933840013303
117_at 7.70646406236312
121_at 9.77671506491173
1255_g_at 6.21008553325326
1294_at 8.0580528627899
1316_at 7.1866601189757
1320_at 7.01292814135229
1405_i_at 7.3972828225875
1431_at 6.20307099671833
1438_at 8.08426480220748
1487_at 8.54510478756058
1494_f_at 7.89144660852655
1598_g_at 9.29306664552672
160020_at 8.84889423514904
1729_at 8.4511583209555
1773_at 7.6870107096308
177_at 7.48680859694004
179_at 10.1236028022969
1861_at 7.87700180970939

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100521.CEL.gz 3.5 Mb (ftp)(http) CEL

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