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Sample GSM100535 Query DataSets for GSM100535
Status Public on Jun 07, 2006
Title MPI-096
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-096
Relapse: no
Age : 40
Sex : male
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 70
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : present
IGH.BCL2.Fusion : present
Chromosomal.Complexity.Score : 13
Genetic.Group : MYC.neg
AnnArbor.Stage : II
Lesions : nodal
B.Symptoms : absent
Survival.Status : alive
FollowupTime..months. : 45.5
Radiotherapy : no
RITUXIMAB : yes
Response.to.treatment : NC
Chemotherapy : CHOP-like
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 0.02
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Sep 18, 2017
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470
Affiliated with GSE103944

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.75829768540682
1053_at 9.27334025028647
117_at 7.58348658987162
121_at 9.7572733095214
1255_g_at 6.22541572724807
1294_at 8.77362638736287
1316_at 7.50499335475887
1320_at 6.9690518574354
1405_i_at 10.3099036903804
1431_at 6.18653792456959
1438_at 8.49321557560622
1487_at 8.2952038069071
1494_f_at 8.08615993485146
1598_g_at 9.69618267542142
160020_at 9.1442087798731
1729_at 9.01011993573371
1773_at 7.52900565649252
177_at 7.5206577037193
179_at 10.1062403231289
1861_at 7.80218828286496

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100535.CEL.gz 3.6 Mb (ftp)(http) CEL

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