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Sample GSM100554 Query DataSets for GSM100554
Status Public on Jun 07, 2006
Title MPI-118
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-118
Relapse: no
Age : 81
Sex : male
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 80
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 9
Genetic.Group : MYC.neg
AnnArbor.Stage : II
Lesions : nodal
B.Symptoms : absent
Survival.Status : dead
FollowupTime..months. : 34.2
Radiotherapy : yes
RITUXIMAB : no
Response.to.treatment : CRu
Chemotherapy : CHOP-like
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : ABC
Training.Test : Test
core.BL : no
BL.probability : 0.03
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 28, 2010
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.71991556575283
1053_at 8.3660186110635
117_at 7.65668833707614
121_at 9.84504295717583
1255_g_at 6.83690807066757
1294_at 8.63607016225636
1316_at 6.96395069329614
1320_at 6.80687841674465
1405_i_at 8.56129643857056
1431_at 6.19187881869478
1438_at 8.03893776563101
1487_at 8.61807912444647
1494_f_at 8.04628268927662
1598_g_at 9.48484576701616
160020_at 8.83847610291312
1729_at 8.74561473600891
1773_at 7.52418201603001
177_at 7.457734141597
179_at 9.95315377388375
1861_at 8.03964633753612

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100554.CEL.gz 3.5 Mb (ftp)(http) CEL

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