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Sample GSM100559 Query DataSets for GSM100559
Status Public on Jun 07, 2006
Title MPI-123
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-123
Relapse: no
Age : 24
Sex : male
Morphologic.diagnosis : atypical BL
CD20.expr. : present
CD10.expr. : present
bcl2.expr. : absent
Ki.67.score : 90
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : IG-MYC
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : NA
Genetic.Group : NA
AnnArbor.Stage : II
Lesions : nodal + extranodal
B.Symptoms : absent
Survival.Status : alive
FollowupTime..months. : 13.6
Radiotherapy : yes
RITUXIMAB : no
Response.to.treatment : CR
Chemotherapy : ALL-like
Molecular.Diagnosis : mBL
GCB.ABC.signature : GCB
Training.Test : Training
core.BL : no
BL.probability : 1
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.79579437371044
1053_at 8.90937303360899
117_at 7.87900059137769
121_at 9.6516228900405
1255_g_at 6.26545892716389
1294_at 8.41833019558824
1316_at 7.2202347055682
1320_at 7.02084658907352
1405_i_at 7.44815377803179
1431_at 6.28976609283431
1438_at 8.0562108482712
1487_at 8.60809189008496
1494_f_at 7.9211286555259
1598_g_at 9.40101176147563
160020_at 8.71145537028139
1729_at 8.4707011773163
1773_at 7.50596029063933
177_at 7.43015355768493
179_at 9.79692438942912
1861_at 7.8040795705455

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100559.CEL.gz 3.5 Mb (ftp)(http) CEL

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