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Sample GSM100569 Query DataSets for GSM100569
Status Public on Jun 07, 2006
Title MPI-134
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-134
Relapse: unk
Age : 29
Sex : female
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 85
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 3
Genetic.Group : MYC.neg
AnnArbor.Stage : NA
Lesions : NA
B.Symptoms : NA
Survival.Status : NA
FollowupTime..months. : NA
Radiotherapy : NA
RITUXIMAB : NA
Response.to.treatment : NA
Chemotherapy : NA
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 0
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Sep 18, 2017
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470
Affiliated with GSE103944

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.69821088918239
1053_at 8.86503376604808
117_at 7.74080846516707
121_at 9.7253220166878
1255_g_at 6.59728421448325
1294_at 8.20185099029957
1316_at 7.43034022418434
1320_at 6.96166515648239
1405_i_at 9.04706878104169
1431_at 6.39352330580967
1438_at 7.93191819875917
1487_at 8.27509703673634
1494_f_at 7.95777899244099
1598_g_at 9.51762420195405
160020_at 8.86251198103624
1729_at 8.80866504796605
1773_at 7.3745135469023
177_at 7.38179112063366
179_at 9.8432298174004
1861_at 7.83553773048154

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100569.CEL.gz 3.5 Mb (ftp)(http) CEL

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