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Sample GSM100573 Query DataSets for GSM100573
Status Public on Jun 07, 2006
Title MPI-139
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-139
Relapse: no
Age : 46
Sex : male
Morphologic.diagnosis : atypical BL
CD20.expr. : present
CD10.expr. : present
bcl2.expr. : NA
Ki.67.score : 75
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : IG-MYC
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 0
Genetic.Group : MYC.simple
AnnArbor.Stage : III
Lesions : NA
B.Symptoms : NA
Survival.Status : alive
FollowupTime..months. : 152.1
Radiotherapy : no
RITUXIMAB : no
Response.to.treatment : CR
Chemotherapy : ALL-like
Molecular.Diagnosis : mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 1
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.81097483394386
1053_at 8.5589793741924
117_at 7.79438575874954
121_at 9.55951669197877
1255_g_at 6.23841915505957
1294_at 8.04543785284758
1316_at 7.230211133242
1320_at 7.01814411418427
1405_i_at 8.27107975386456
1431_at 6.2831231521675
1438_at 8.08408280048075
1487_at 8.39874667573287
1494_f_at 7.93895365651956
1598_g_at 9.17584527144088
160020_at 8.88652041721948
1729_at 8.32875376435124
1773_at 7.25965377162262
177_at 7.4919442246079
179_at 9.80033170683165
1861_at 7.47369846912034

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100573.CEL.gz 3.3 Mb (ftp)(http) CEL

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