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Sample GSM100586 Query DataSets for GSM100586
Status Public on Jun 07, 2006
Title MPI-152
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-152
Relapse: no
Age : 66
Sex : female
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 80
CD5.expr. : NA
bcl6.expr. : NA
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 12
Genetic.Group : MYC.neg
AnnArbor.Stage : II
Lesions : nodal + extranodal
B.Symptoms : present
Survival.Status : alive
FollowupTime..months. : 16.4
Radiotherapy : yes
RITUXIMAB : no
Response.to.treatment : Progress
Chemotherapy : CHOP-like
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : ABC
Training.Test : Test
core.BL : no
BL.probability : 0
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 28, 2010
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.6020393598896
1053_at 8.39131130164388
117_at 7.97090459340932
121_at 9.68214597327932
1255_g_at 6.54229188502894
1294_at 8.54396346755275
1316_at 7.291424907019
1320_at 6.95819669384528
1405_i_at 8.45073928679401
1431_at 6.29821949273715
1438_at 7.9864761550236
1487_at 8.54877968536639
1494_f_at 7.7424141228155
1598_g_at 9.56833623409182
160020_at 8.841470147745
1729_at 8.75950993788467
1773_at 7.40814473698262
177_at 7.36612752652991
179_at 9.79803846966374
1861_at 7.85897449228738

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100586.CEL.gz 3.4 Mb (ftp)(http) CEL

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