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Sample GSM100589 Query DataSets for GSM100589
Status Public on Jun 07, 2006
Title MPI-155
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-155
Relapse: unk
Age : 66
Sex : female
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : present
Ki.67.score : 80
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 12
Genetic.Group : MYC.neg
AnnArbor.Stage : I
Lesions : extranodal
B.Symptoms : NA
Survival.Status : alive
FollowupTime..months. : 95.8
Radiotherapy : yes
RITUXIMAB : no
Response.to.treatment : CR
Chemotherapy : CHOP-like
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : unclassified
Training.Test : Training
core.BL : no
BL.probability : 0
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.87635388412453
1053_at 8.54103361814447
117_at 8.0554028994672
121_at 9.64263095922796
1255_g_at 7.57109102006723
1294_at 8.2949962488953
1316_at 7.19282948003744
1320_at 6.8731190557166
1405_i_at 8.91260032648549
1431_at 6.30864257593074
1438_at 8.21129747416787
1487_at 8.67856564907959
1494_f_at 7.92528733667912
1598_g_at 9.23313631708757
160020_at 8.88316659502827
1729_at 8.6822575681999
1773_at 7.42650874356115
177_at 7.37378108505308
179_at 9.74039710592747
1861_at 7.6553555408577

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100589.CEL.gz 3.4 Mb (ftp)(http) CEL

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