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Sample GSM100601 Query DataSets for GSM100601
Status Public on Jun 07, 2006
Title MPI-171
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-171
Relapse: unk
Age : 24
Sex : female
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : present
bcl2.expr. : present
Ki.67.score : 98
CD5.expr. : absent
bcl6.expr. : NA
MYC.Partner : IG-MYC
BCL6.Break : absent
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 3
Genetic.Group : MYC.simple
AnnArbor.Stage : NA
Lesions : NA
B.Symptoms : NA
Survival.Status : NA
FollowupTime..months. : NA
Radiotherapy : NA
RITUXIMAB : NA
Response.to.treatment : NA
Chemotherapy : NA
Molecular.Diagnosis : mBL
GCB.ABC.signature : GCB
Training.Test : Training
core.BL : no
BL.probability : 1
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 07, 2006
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.96538537276869
1053_at 9.08462347007069
117_at 7.76083005220602
121_at 9.67246612264683
1255_g_at 6.31836503665682
1294_at 8.05919854970403
1316_at 7.26701315620355
1320_at 6.84242526791606
1405_i_at 6.9521421808307
1431_at 6.194783118213
1438_at 7.89301700010012
1487_at 8.75283767441905
1494_f_at 7.8969147362033
1598_g_at 9.16542536463335
160020_at 8.8104293968781
1729_at 8.49580241808778
1773_at 7.43605346347856
177_at 7.36717512237405
179_at 9.82700103473292
1861_at 7.94909399257634

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100601.CEL.gz 3.5 Mb (ftp)(http) CEL

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