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Sample GSM100633 Query DataSets for GSM100633
Status Public on Jun 07, 2006
Title MPI-205
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-205
Relapse: no
Age : 48
Sex : male
Morphologic.diagnosis : DLBCL
CD20.expr. : present
CD10.expr. : absent
bcl2.expr. : absent
Ki.67.score : 80
CD5.expr. : absent
bcl6.expr. : present
MYC.Partner : MYC-negative
BCL6.Break : present
IGH.BCL2.Fusion : absent
Chromosomal.Complexity.Score : 16
Genetic.Group : MYC.neg
AnnArbor.Stage : III
Lesions : nodal + extranodal
B.Symptoms : absent
Survival.Status : alive
FollowupTime..months. : 0.5
Radiotherapy : NA
RITUXIMAB : NA
Response.to.treatment : NA
Chemotherapy : NA
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : unclassified
Training.Test : Test
core.BL : no
BL.probability : 0
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Jun 28, 2010
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.48022376775713
1053_at 8.20111258410696
117_at 7.9952009656263
121_at 9.62713963094244
1255_g_at 6.20614830812251
1294_at 8.53498453695859
1316_at 7.19560078793761
1320_at 6.84388538359377
1405_i_at 7.11892806789191
1431_at 6.07268595551329
1438_at 8.11771712692576
1487_at 8.82450879284904
1494_f_at 7.90718478913745
1598_g_at 9.35756605282069
160020_at 8.85647659121877
1729_at 8.53309449791671
1773_at 7.5425687999606
177_at 7.53175659844412
179_at 9.8606189324379
1861_at 7.78224060584161

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100633.CEL.gz 3.4 Mb (ftp)(http) CEL

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