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Sample GSM100652 Query DataSets for GSM100652
Status Public on Jun 07, 2006
Title MPI-228
Sample type RNA
 
Source name Frozen tissue
Organism Homo sapiens
Characteristics sample.ID : MPI-228
Relapse: no
Age : 54
Sex : male
Morphologic.diagnosis : aggressive B-NHL.unclassifiable
CD20.expr. : present
CD10.expr. : NA
bcl2.expr. : present
Ki.67.score : NA
CD5.expr. : absent
bcl6.expr. : NA
MYC.Partner : MYC-negative
BCL6.Break : present
IGH.BCL2.Fusion : present
Chromosomal.Complexity.Score : NA
Genetic.Group : MYC.neg
AnnArbor.Stage : IV
Lesions : NA
B.Symptoms : absent
Survival.Status : alive
FollowupTime..months. : 85.6
Radiotherapy : no
RITUXIMAB : no
Response.to.treatment : CR
Chemotherapy : CHOP-like
Molecular.Diagnosis : non-mBL
GCB.ABC.signature : GCB
Training.Test : Test
core.BL : no
BL.probability : 0.01
Extracted molecule total RNA
Label Biotin
 
Description Mature aggressive B-cell lymphoma
Data processing Probe level normalization was done using the calibration and variance stabilization method by Huber et al. (Bioinformatics 2002, PMID: 12169536). Probe-set summarization was performed using the median polish method on the normalized data (Irrizary et al. Nucleic Acids Research 2003, PMID: 12582260).
 
Submission date Mar 15, 2006
Last update date Sep 18, 2017
Contact name Michael Hummel
Organization name Universitätsmedizin Berlin, Campus Benjamin Franklin
Department Institute of Pathology
Street address Hindenburgdamm 30
City Berlin
ZIP/Postal code 12200
Country Germany
 
Platform ID GPL96
Series (1)
GSE4475 A Biologic Definition of Burkitt's Lymphoma from Transcriptional and Genomic Profiling
Relations
Affiliated with GSE22470
Affiliated with GSE103944

Data table header descriptions
ID_REF
VALUE Normalized and summarized probeset expression value on additive arcsin (log-like) scale

Data table
ID_REF VALUE
1007_s_at 8.46218952468616
1053_at 8.41541033062584
117_at 8.08423727291073
121_at 9.6260703815395
1255_g_at 6.19732597673143
1294_at 8.08359545860023
1316_at 7.54660469926531
1320_at 6.90599300019545
1405_i_at 8.4369909244203
1431_at 6.21751161773118
1438_at 8.00016145847654
1487_at 8.58586478502073
1494_f_at 7.74600364154197
1598_g_at 9.46681849574414
160020_at 8.94947936323256
1729_at 8.617900335408
1773_at 7.3200216315404
177_at 7.17624295421668
179_at 9.75639664333495
1861_at 7.55990179111881

Total number of rows: 22283

Table truncated, full table size 604 Kbytes.




Supplementary file Size Download File type/resource
GSM100652.CEL.gz 3.4 Mb (ftp)(http) CEL

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