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Sample GSM102196 Query DataSets for GSM102196
Status Public on Mar 30, 2006
Title LS-38
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics Cancer
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from lung squamous cell carcinoma samples according to Standard Trizol protocol.
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description lung squamous carcinoma
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Mar 29, 2006
Last update date Mar 29, 2006
Contact name Jack Yu
E-mail(s) [email protected]
Phone 858-320-3362
Fax 858-784-3182
Organization name Veridex, LLC
Street address 3210 Merryfield Row
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL96
Series (1)
GSE4573 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity after global scaling the average intensity to 600.

Data table
ID_REF VALUE
AFFX-BioB-5_at 396.2
AFFX-BioB-M_at 648.2
AFFX-BioB-3_at 329.4
AFFX-BioC-5_at 1316.7
AFFX-BioC-3_at 1161.7
AFFX-BioDn-5_at 1836.2
AFFX-BioDn-3_at 7829
AFFX-CreX-5_at 13307.2
AFFX-CreX-3_at 18676.6
AFFX-DapX-5_at 67.8
AFFX-DapX-M_at 45.2
AFFX-DapX-3_at 11.8
AFFX-LysX-5_at 21
AFFX-LysX-M_at 14.8
AFFX-LysX-3_at 8.6
AFFX-PheX-5_at 8
AFFX-PheX-M_at 10.6
AFFX-PheX-3_at 112.7
AFFX-ThrX-5_at 12.9
AFFX-ThrX-M_at 9.6

Total number of rows: 22283

Table truncated, full table size 362 Kbytes.




Supplementary data files not provided
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