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Sample GSM102197 Query DataSets for GSM102197
Status Public on Mar 30, 2006
Title LS-40
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics Cancer
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from lung squamous cell carcinoma samples according to Standard Trizol protocol.
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description lung squamous carcinoma
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Mar 29, 2006
Last update date Mar 29, 2006
Contact name Jack Yu
E-mail(s) [email protected]
Phone 858-320-3362
Fax 858-784-3182
Organization name Veridex, LLC
Street address 3210 Merryfield Row
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL96
Series (1)
GSE4573 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity after global scaling the average intensity to 600.

Data table
ID_REF VALUE
AFFX-BioB-5_at 344.3
AFFX-BioB-M_at 562.7
AFFX-BioB-3_at 331.2
AFFX-BioC-5_at 1300.4
AFFX-BioC-3_at 1031.7
AFFX-BioDn-5_at 1987.9
AFFX-BioDn-3_at 7158.2
AFFX-CreX-5_at 12400
AFFX-CreX-3_at 18336.9
AFFX-DapX-5_at 53.5
AFFX-DapX-M_at 44.3
AFFX-DapX-3_at 12.4
AFFX-LysX-5_at 27.7
AFFX-LysX-M_at 58.4
AFFX-LysX-3_at 9
AFFX-PheX-5_at 5.4
AFFX-PheX-M_at 7.5
AFFX-PheX-3_at 18.3
AFFX-ThrX-5_at 11.4
AFFX-ThrX-M_at 58.1

Total number of rows: 22283

Table truncated, full table size 362 Kbytes.




Supplementary data files not provided
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