NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM102240 Query DataSets for GSM102240
Status Public on Mar 30, 2006
Title LS-134
Sample type RNA
 
Source name lung
Organism Homo sapiens
Characteristics Cancer
Extracted molecule total RNA
Extraction protocol Total RNA was isolated from lung squamous cell carcinoma samples according to Standard Trizol protocol.
Label biotin
Label protocol Approximately 5 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description lung squamous carcinoma
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Mar 29, 2006
Last update date Mar 29, 2006
Contact name Jack Yu
E-mail(s) [email protected]
Phone 858-320-3362
Fax 858-784-3182
Organization name Veridex, LLC
Street address 3210 Merryfield Row
City San Diego
State/province CA
ZIP/Postal code 92121
Country USA
 
Platform ID GPL96
Series (1)
GSE4573 Gene expression signatures for predicting prognosis of squamous cell lung carcinomas

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity after global scaling the average intensity to 600.

Data table
ID_REF VALUE
AFFX-BioB-5_at 295.2
AFFX-BioB-M_at 369.9
AFFX-BioB-3_at 170.5
AFFX-BioC-5_at 965.9
AFFX-BioC-3_at 746.5
AFFX-BioDn-5_at 1472.7
AFFX-BioDn-3_at 5591.3
AFFX-CreX-5_at 8955
AFFX-CreX-3_at 14276.8
AFFX-DapX-5_at 45.8
AFFX-DapX-M_at 77.4
AFFX-DapX-3_at 39.3
AFFX-LysX-5_at 4
AFFX-LysX-M_at 12.3
AFFX-LysX-3_at 31.6
AFFX-PheX-5_at 9.3
AFFX-PheX-M_at 8.9
AFFX-PheX-3_at 55.4
AFFX-ThrX-5_at 6.9
AFFX-ThrX-M_at 45.5

Total number of rows: 22283

Table truncated, full table size 362 Kbytes.




Supplementary data files not provided
| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap