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Status
Public on Apr 10, 2006
Title
35S:AP1-GR ap1 cal 2d vs. 3d set4
Sample type
RNA
Channel 1 Source name
35S:AP1-GR ap1 cal 3d
Organism
Arabidopsis thaliana Characteristics
Material was derived from inflorescences of 35S:AP1-GR ap1 cal plants, 3d after activation of the AP1-GR fusion protein with dexamethasone
Extracted molecule
polyA RNA
Label
Cy3
Channel 2 Source name
35S:AP1-GR ap1 cal 2d
Organism
Arabidopsis thaliana Characteristics
Material was derived from inflorescences of 35S:AP1-GR ap1 cal plants, 2d after activation of the AP1-GR fusion protein with dexamethasone
Extracted molecule
polyA RNA
Label
Cy5
Description
Plants were grown on a soil:vermiculite:perlite mixture under constant illumination at 20°C. Immediately after the onset of bolting, the inflorescences of 35S:AP1-GR ap1 cal plants were treated with a solution containing 1 μM dexamethasone (Sigma-Aldrich, St. Louis, MO, USA), 0.01% (v/v) ethanol, and 0.015% (v/v) Silwet L-77. For each time point, tissue from ~25 plants was collected using jewelers forceps. Tissue was removed as close to the surface of the inflorescence as possible to ensure an enrichment of meristematic cells.
Data processing
Data were processed in Rosetta Resolver v4.0
Submission date
Apr 02, 2006
Last update date
Apr 05, 2006
Contact name
Frank Wellmer
E-mail(s)
[email protected] Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL2810 Series (1)
GSE4594 Gene expression during early Arabidopsis flower development
Data table header descriptions ID_REF Intensity1 Absolute intensity measurement for the 3d sample after background subtraction and normalization
Intensity2 Absolute intensity measurement for the 2d sample after background subtraction and normalization
P-value Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE Log10 ratio
Data table ID_REF Intensity1 Intensity2 P-value VALUE A000117_01
0.10128
0.09551
0.98172
-0.00274
A000545_01
0.04330
0.03724
0.78161
-0.04277
A005265_01
0.07283
0.06371
0.81515
-0.03532
A005245_01
0.01631
0.01246
0.86156
-0.09420
A005641_01
0.10579
0.07628
0.51198
-0.11926
A005621_01
0.61324
0.47898
0.39778
-0.08456
A004153_01
0.04183
0.04268
0.88989
0.03144
A004529_01
0.02133
0.01496
0.72468
-0.13138
A002605_01
0.13581
0.10477
0.42360
-0.08992
A002629_01
0.01186
0.01246
0.94474
0.04418
A005693_01
0.17653
0.13846
0.54588
-0.08276
A004929_01
0.08180
0.07363
0.92023
-0.02294
A005261_01
0.04330
0.02055
0.41356
-0.30083
A010581_01
0.23931
0.29653
0.24662
0.11586
A010561_01
0.17578
0.11137
0.20994
-0.17543
A009421_01
0.00919
0.01301
0.86405
0.17396
A009825_01
0.24007
0.17273
0.37658
-0.12022
A009829_01
0.03322
0.03794
0.77760
0.08048
A009093_01
0.11029
0.11401
0.80401
0.03717
A012505_01
0.04036
0.03373
0.85041
-0.05517
30741 1307 Kbytes .Supplementary file Size Download File type/resource GSM102808.gpr.gz
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