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Status
Public on Apr 10, 2006
Title
35S:AP1-GR ap1 cal 4d vs. 5d set1
Sample type
RNA
Channel 1 Source name
35S:AP1-GR ap1 cal 4d
Organism
Arabidopsis thaliana Characteristics
Material was derived from inflorescences of 35S:AP1-GR ap1 cal plants, 4d after activation of the AP1-GR fusion protein with dexamethasone
Extracted molecule
polyA RNA
Label
Cy3
Channel 2 Source name
35S:AP1-GR ap1 cal 5d
Organism
Arabidopsis thaliana Characteristics
Material was derived from inflorescences of 35S:AP1-GR ap1 cal plants, 5d after activation of the AP1-GR fusion protein with dexamethasone
Extracted molecule
polyA RNA
Label
Cy5
Description
Plants were grown on a soil:vermiculite:perlite mixture under constant illumination at 20°C. Immediately after the onset of bolting, the inflorescences of 35S:AP1-GR ap1 cal plants were treated with a solution containing 1 μM dexamethasone (Sigma-Aldrich, St. Louis, MO, USA), 0.01% (v/v) ethanol, and 0.015% (v/v) Silwet L-77. For each time point, tissue from ~25 plants was collected using jewelers forceps. Tissue was removed as close to the surface of the inflorescence as possible to ensure an enrichment of meristematic cells.
Data processing
Data were processed in Rosetta Resolver v4.0
Submission date
Apr 02, 2006
Last update date
Apr 05, 2006
Contact name
Frank Wellmer
E-mail(s)
[email protected] Phone
626-395-8438
Organization name
California Institute of Technology
Department
Biology 156-29
Lab
Meyerowitz
Street address
1200 E. California Blvd.
City
Pasadena
State/province
CA
ZIP/Postal code
91125
Country
USA
Platform ID
GPL2810 Series (1)
GSE4594 Gene expression during early Arabidopsis flower development
Data table header descriptions ID_REF Intensity1 Absolute intensity measurement for the 4d sample after background subtraction and normalization
Intensity2 Absolute intensity measurement for the 5d sample after background subtraction and normalization
P-value Value describing the confidence that the element's expression ratio reflects a change in expression not due to measurement errors
VALUE Log10 ratio
Data table ID_REF Intensity1 Intensity2 P-value VALUE A000117_01
0.04924
0.04165
0.61318
-0.05055
A000545_01
0.01633
0.01595
0.93077
0.01176
A005265_01
0.04003
0.04061
0.80699
0.02830
A005245_01
0.00984
0.00736
0.76978
-0.10401
A005641_01
0.24586
0.13943
0.02492
-0.22426
A005621_01
0.73997
0.67113
0.83898
-0.02032
A004153_01
0.04838
0.05088
0.67812
0.04403
A004529_01
0.01292
0.01193
0.94976
-0.01270
A002605_01
1.40026
0.77644
0.01928
-0.23402
A002629_01
0.00440
0.00577
0.76500
0.13985
A005693_01
0.01569
0.01302
0.75547
-0.05899
A004929_01
0.03336
0.03008
0.87507
-0.02279
A005261_01
0.02290
0.04668
0.05389
0.33133
A010581_01
1.32199
1.70617
0.18391
0.13288
A010561_01
0.10203
0.07086
0.17316
-0.13621
A009421_01
0.01355
0.01064
0.77516
-0.08301
A009825_01
0.24522
0.20864
0.63068
-0.04808
A009829_01
0.01948
0.01448
0.60691
-0.10669
A009093_01
0.07638
0.06203
0.51234
-0.06832
A012505_01
0.00963
0.00648
0.73880
-0.15008
30741 1307 Kbytes .Supplementary file Size Download File type/resource GSM102813.gpr.gz
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