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Sample GSM118473 Query DataSets for GSM118473
Status Public on Aug 31, 2006
Title Yeast yox1yhp1 mutant cell cycle-time point 100 min 2001-04-12_2665-100
Sample type RNA
 
Channel 1
Source name Yeast yox1yhp1 mutant cell cycle-time point 100 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1yhp1 mutant cell cycle-time point 100 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1yhp1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 05, 2006
Last update date Jul 11, 2006
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5283 Yeast W303 yox1yhp1 mutant cell cycle

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
Ratio
Flagged? FALSE for good spot and TRUE for bad spot
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE Ratio Flagged? UNF_VALUE
blank -0.006515722 0.985108972 FALSE -0.006515722
E. coli control 0.122167423 1.324852228 FALSE 0.122167423
empty 0.877435446 TRUE -0.056784838
Human Control 0.120494194 1.3197577 FALSE 0.120494194
Lambda Control 0.165653825 1.464380145 FALSE 0.165653825
n1 0.023172112 1.054804802 FALSE 0.023172112
n2 0.044343367 1.107499003 FALSE 0.044343367
p1 -0.00986869 0.977532744 FALSE -0.00986869
p2 0.006786967 1.015750289 FALSE 0.006786967
Phi174 Control 0.174359903 1.494032025 FALSE 0.174359903
YAL001C 0.094345875 1.242641568 FALSE 0.094345875
YAL002W 0.061832316 1.153007984 FALSE 0.061832316
YAL003W -0.109208703 0.777662754 FALSE -0.109208703
YAL004W -0.267585605 0.540025652 FALSE -0.267585605
YAL005C -0.06791497 0.855234146 FALSE -0.06791497
YAL007C 0.050590444 1.123544931 FALSE 0.050590444
YAL008W 0.007171652 1.016650438 FALSE 0.007171652
YAL009W 0.070066579 1.175077677 FALSE 0.070066579
YAL010C -0.005978793 0.986327648 FALSE -0.005978793
YAL011W 0.029250817 1.069672465 FALSE 0.029250817

Total number of rows: 6228

Table truncated, full table size 306 Kbytes.




Supplementary file Size Download File type/resource
GSM118473.gpr.gz 480.5 Kb (ftp)(http) GPR

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