GEO help: Mouse over screen elements for information.
Status
Public on Mar 18, 2005
Title
FHCRC Yeast Amplicon v1.1
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Saccharomyces cerevisiae
Description
Yeast ORF microarrays were constructed employing a set of 6229 ORF-specific PCR primer pairs (Research Genetics, Huntsville, AL). Individual PCR products were verified as unique via gel electrophoresis, purified, and mechanically "spotted" onto glass microscope slides using an OmniGrid high-precision robotic gridder (GeneMachines, San Carlo, CA).
Submission date
Mar 15, 2005
Last update date
Jul 03, 2008
Contact name
Ryan Basom
Organization name
Fred Hutchinson Cancer Research Center
Lab
Genomics and Bioinformatics Shared Resources
Street address
1100 Fairview Ave N
City
Seattle
State/province
WA
ZIP/Postal code
98109
Country
USA
Samples (168)
GSM81064 , GSM81065 , GSM81066 , GSM81067 , GSM81068 , GSM81069
GSM81070 ,
GSM81071 ,
GSM81072 ,
GSM81073 ,
GSM81074 ,
GSM81075 ,
GSM81076 ,
GSM112133 ,
GSM112134 ,
GSM112135 ,
GSM112136 ,
GSM112137 ,
GSM112138 ,
GSM112139 ,
GSM112140 ,
GSM112141 ,
GSM112142 ,
GSM112143 ,
GSM112144 ,
GSM112145 ,
GSM112146 ,
GSM112147 ,
GSM112148 ,
GSM112149 ,
GSM112150 ,
GSM112151 ,
GSM112152 ,
GSM112153 ,
GSM112154 ,
GSM112155 ,
GSM112156 ,
GSM112157 ,
GSM112158 ,
GSM112159 ,
GSM112160 ,
GSM112161 ,
GSM112162 ,
GSM112163 ,
GSM112164 ,
GSM112165 ,
GSM112166 ,
GSM112167 ,
GSM112168 ,
GSM112169 ,
GSM112170 ,
GSM112171 ,
GSM112172 ,
GSM112173 ,
GSM112174 ,
GSM112175 ,
GSM112176 ,
GSM112177 ,
GSM112178 ,
GSM112179 ,
GSM112180 ,
GSM112181 ,
GSM112182 ,
GSM118463 ,
GSM118464 ,
GSM118465 ,
GSM118466 ,
GSM118467 ,
GSM118468 ,
GSM118469 ,
GSM118470 ,
GSM118471 ,
GSM118472 ,
GSM118473 ,
GSM118474 ,
GSM118475 ,
GSM120036 ,
GSM120037 ,
GSM120038 ,
GSM120039 ,
GSM120040 ,
GSM120041 ,
GSM120042 ,
GSM120043 ,
GSM120044 ,
GSM120045 ,
GSM120046 ,
GSM120047 ,
GSM120048 ,
GSM120049 ,
GSM120050 ,
GSM120051 ,
GSM120052 ,
GSM120053 ,
GSM120054 ,
GSM120055 ,
GSM120056 ,
GSM120057 ,
GSM120058 ,
GSM120059 ,
GSM120060 ,
GSM120167 ,
GSM120168 ,
GSM120169 ,
GSM120170 ,
GSM120171 ,
GSM120172 ,
GSM120173 ,
GSM120174 ,
GSM120175 ,
GSM120176 ,
GSM120177 ,
GSM120178 ,
GSM120179 ,
GSM120180 ,
GSM120181 ,
GSM120182 ,
GSM120183 ,
GSM120184 ,
GSM120185 ,
GSM120186 ,
GSM120187 ,
GSM120188 ,
GSM120189 ,
GSM120190 ,
GSM120191 ,
GSM227139 ,
GSM230927 ,
GSM230928 ,
GSM230929 ,
GSM230930 ,
GSM230931 ,
GSM230932 ,
GSM230933 ,
GSM230934 ,
GSM230935 ,
GSM230936 ,
GSM230937 ,
GSM230938 ,
GSM230939 ,
GSM230940 ,
GSM230941 ,
GSM230942 ,
GSM230943 ,
GSM230944 ,
GSM303504 ,
GSM303505 ,
GSM303506 ,
GSM303508 ,
GSM303509 ,
GSM303513 ,
GSM303514 ,
GSM303515 ,
GSM303516 ,
GSM303517 ,
GSM303518 ,
GSM303519 ,
GSM341370 ,
GSM341372 ,
GSM341373 ,
GSM344286 ,
GSM344583 ,
GSM382760 ,
GSM382761 ,
GSM382762 ,
GSM382763 ,
GSM382764 ,
GSM382765 Series (8)
GSE3635 Saccharomyces cerevisiae alpha factor cell cycle
GSE4987 Yeast cell cycle
GSE5283 Yeast W303 yox1yhp1 mutant cell cycle
GSE5376 Cell cycle of yeast deleted for yox1
GSE9122 Yeast replication in the presence of MMS: WT and isw2 nhp10 strains
GSE12004 Transcriptional profiles of yeast on acetate exposed to pure nitrogen or carbon monoxide
GSE13703 Transcriptional response of Saccharomyces cerevisiae to high glucose (20%) concentration
GSE15302 Cells following mtDNA loss, or NAR1 repression
Data table header descriptions ID ORF SPOT_ID Gene SGDID CHR ORF Length Process Function Component
Data table ID ORF SPOT_ID Gene SGDID CHR ORF Length Process Function Component YPR203W
YPR203W S0006407
XVI
309
biological_process unknown
molecular_function unknown
cellular_component unknown
YPR202W
YPR202W S0006406
XVI
865
biological_process unknown
molecular_function unknown
cellular_component unknown
YPR201W
YPR201W ARR3
S0006405
XVI
1215
not yet annotated
arsenite transporter
not yet annotated
YPR200C
YPR200C ARR2
S0006404
XVI
393
not yet annotated
molecular_function unknown
not yet annotated
YPR199C
YPR199C ARR1
S0006403
XVI
885
transcription
not yet annotated
not yet annotated
YPR198W
YPR198W SGE1
S0006402
XVI
1632
not yet annotated
transporter
not yet annotated
YPR197C
YPR197C S0006401
XVI
564
biological_process unknown
molecular_function unknown
cellular_component unknown
YPR196W
YPR196W S0006400
XVI
1413
biological_process unknown
molecular_function unknown
nucleus
YPR195C
YPR195C S0006399
XVI
330
biological_process unknown
molecular_function unknown
cellular_component unknown
YPR194C
YPR194C S0006398
XVI
2634
oligopeptide transport
oligopeptide transporter
cellular_component unknown
YPR193C
YPR193C HPA2
S0006397
XVI
471
not yet annotated
not yet annotated
cytoplasm
YPR192W
YPR192W AQY1
S0006396
XVI
918
water transport
water channel
cellular_component unknown
YPR191W
YPR191W QCR2
S0006395
XVI
1107
not yet annotated
ubiquinol-cytochrome c reductase
mitochondrion
YPR190C
YPR190C RPC82
S0006394
XVI
1965
transcription, from Pol III promoter
DNA-directed RNA polymerase III
DNA-directed RNA polymerase III complex
YPR189W
YPR189W SKI3
S0006393
XVI
4299
mRNA catabolism
molecular_function unknown
not yet annotated
YPR188C
YPR188C S0006392
XVI
492
not yet annotated
not yet annotated
not yet annotated
YPR187W
YPR187W RPO26
S0006391
XVI
544
transcription, from Pol II promoter*
DNA-directed RNA polymerase III*
DNA-directed RNA polymerase III complex*
YPR186C
YPR186C PZF1
S0006390
XVI
1290
transcription initiation, from Pol III promoter
RNA polymerase III transcription factor
transcription factor complex
YPR185W
YPR185W APG13
S0006389
XVI
2217
autophagy*
molecular_function unknown
cellular_component unknown
YPR184W
YPR184W S0006388
XVI
4611
not yet annotated
not yet annotated
not yet annotated
6336 657 Kbytes .Supplementary data files not provided
Less...
More...