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Sample GSM120042 Query DataSets for GSM120042
Status Public on Sep 30, 2007
Title 2001-08-15_2399-30
Sample type RNA
 
Channel 1
Source name Yeast yox1mutant cell cycle-time point 30 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1 mutant cell cycle-time point 30 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 12, 2006
Last update date Mar 21, 2007
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5376 Cell cycle of yeast deleted for yox1

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
FLAG
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE FLAG UNF_VALUE
blank 0.043456834 FALSE 0.043456834
E. coli control TRUE -0.243930772
empty TRUE -0.071261242
Human Control -0.405990809 FALSE -0.405990809
Lambda Control TRUE -0.628305435
n1 0.048322819 FALSE 0.048322819
n2 0.004196581 FALSE 0.004196581
p1 0.028325992 FALSE 0.028325992
p2 0.01533198 FALSE 0.01533198
Phi174 Control TRUE -1.25180769
YAL001C 0.15657118 FALSE 0.15657118
YAL002W 0.105780684 FALSE 0.105780684
YAL003W -0.034442224 FALSE -0.034442224
YAL004W -0.183034077 FALSE -0.183034077
YAL005C 0.190712154 FALSE 0.190712154
YAL007C TRUE 1.281445026
YAL008W 0.015257655 FALSE 0.015257655
YAL009W 0.044966403 FALSE 0.044966403
YAL010C 0.019785868 FALSE 0.019785868
YAL011W 0.071138866 FALSE 0.071138866

Total number of rows: 6228

Table truncated, full table size 232 Kbytes.




Supplementary file Size Download File type/resource
GSM120042.gpr.gz 500.8 Kb (ftp)(http) GPR

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