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Sample GSM120057 Query DataSets for GSM120057
Status Public on Sep 30, 2007
Title 2001-08-16_2399-105
Sample type RNA
 
Channel 1
Source name Yeast yox1mutant cell cycle-time point 105 min
Organism Saccharomyces cerevisiae
Characteristics Yeast yox1 mutant cell cycle-time point 105 min
Treatment protocol Cells were arrested with alpha factor,and released into YEPD to get a synchronized population. Cells were sampled every 10 min after relase.
Extracted molecule total RNA
Label Cy5
 
Channel 2
Source name Yeast (wild type) asynchronous culture
Organism Saccharomyces cerevisiae
Characteristics Yeast (wild type) asynchronous culture
Treatment protocol Cells were grown overnight to an OD of 0.6 in YEPD
Extracted molecule total RNA
Label Cy3
 
 
Description Yeast yox1 mutant cell cycle
Data processing log10 ratio of medians[(F635-B635)/(F532-BF532)], normalized
 
Submission date Jul 12, 2006
Last update date Mar 21, 2007
Contact name Tata Pramila
E-mail(s) [email protected]
Phone (206)6674483
Organization name FHCRC
Department Basic Sciences
Lab Breeden Lab
Street address 1100, Fairview Avenue N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Platform ID GPL1914
Series (1)
GSE5376 Cell cycle of yeast deleted for yox1

Data table header descriptions
ID_REF Array identifier
VALUE same as UNF_VALUE but with flagged values removed
FLAG
UNF_VALUE Normalized, log10 ratio of medians defined as Ch1 divided by Ch2[(F635-B635)/(F532-BF532)]

Data table
ID_REF VALUE FLAG UNF_VALUE
blank 0.006981387 FALSE 0.006981387
E. coli control -0.015255457 FALSE -0.015255457
empty TRUE 1.947115898
Human Control -0.141342878 FALSE -0.141342878
Lambda Control -0.077559575 FALSE -0.077559575
n1 -0.075396486 FALSE -0.075396486
n2 -0.170599207 FALSE -0.170599207
p1 -0.095885582 FALSE -0.095885582
p2 -0.122983664 FALSE -0.122983664
Phi174 Control TRUE 1.677170992
YAL001C 0.073692113 FALSE 0.073692113
YAL002W 0.054002296 FALSE 0.054002296
YAL003W -0.053398185 FALSE -0.053398185
YAL004W -0.834481597 FALSE -0.834481597
YAL005C -0.004819403 FALSE -0.004819403
YAL007C 0.200399756 FALSE 0.200399756
YAL008W 0.166057602 FALSE 0.166057602
YAL009W 0.067942403 FALSE 0.067942403
YAL010C TRUE -0.231183946
YAL011W -0.105014168 FALSE -0.105014168

Total number of rows: 6228

Table truncated, full table size 228 Kbytes.




Supplementary file Size Download File type/resource
GSM120057.gpr.gz 498.1 Kb (ftp)(http) GPR

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