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Sample GSM13177 Query DataSets for GSM13177
Status Public on Dec 04, 2003
Title Ileum 2B
Sample type RNA
 
Source name Whole segment, ileum, pool of 10 mice
Organism Mus musculus
Extracted molecule total RNA
 
Description 8 week-old male Hsd:ICR(CD-1) mice were fed ad libitum a standard chow (Harlan Teklad diet 2018S) and housed in groups of five. Animals were then divided into 3 pools (n=10) and sacrificed. The small intestine was extracted and divided into three sections, where the first 2-3 cm after the stomach comprised the duodenum, the middle third the jejunum, and the section before the ileo-ceco-colic junction comprised the ileum. Colon was not divided into proximal and distal sections and was treated as a single intestinal section.
 
Submission date Dec 03, 2003
Last update date May 28, 2005
Contact name Pascale Anderle
E-mail(s) [email protected]
Phone +41 692 5859
Organization name ISREC
Department
Street address
City Epalinges
ZIP/Postal code 1066
Country Switzerland
 
Platform ID GPL82
Series (1)
GSE849 Genomic profile of the mouse intestine

Data table header descriptions
ID_REF
VALUE MAS5 data
LN_I2_ADI nat. log transformed MAS5 data
LN_I2_ADI_Norm nat. log transformed, normalized MAS5 data

Data table
ID_REF VALUE LN_I2_ADI LN_I2_ADI_Norm
AFFX-MurIL2_at 44.2 3.789 3.674
AFFX-MurIL10_at 131.7 4.881 4.856
AFFX-MurIL4_at 41.7 3.731 3.642
AFFX-MurFAS_at 249.4 5.519 5.541
AFFX-BioB-5_at 1135.4 7.035 7.055
AFFX-BioB-M_at 2040 7.621 7.611
AFFX-BioB-3_at 1772.6 7.48 7.481
AFFX-BioC-5_at 3876.8 8.263 8.204
AFFX-BioC-3_at 3129.5 8.049 8.014
AFFX-BioDn-5_at 3620.8 8.194 8.151
AFFX-BioDn-3_at 16602.9 9.717 9.561
AFFX-CreX-5_at 38386.7 10.555 10.4
AFFX-CreX-3_at 58710.9 10.98 10.862
AFFX-BioB-5_st 370.4 5.915 5.937
AFFX-BioB-M_st 315.6 5.754 5.772
AFFX-BioB-3_st 120.9 4.795 4.779
AFFX-BioC-5_st 138.8 4.933 4.883
AFFX-BioC-3_st 151.6 5.021 4.976
AFFX-BioDn-5_st 350.5 5.859 5.884
AFFX-BioDn-3_st 442.2 6.092 6.119

Total number of rows: 12477

Table truncated, full table size 334 Kbytes.




Supplementary data files not provided

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