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Sample GSM153504 Query DataSets for GSM153504
Status Public on Dec 30, 2006
Title neurological disease control sample x203
Sample type RNA
 
Source name whole blood
Organism Homo sapiens
Characteristics neurological disease control
Extracted molecule total RNA
Extraction protocol Venous blood was collected in PAXgene (PreAnalytiX) tubes and immediately incubated at room temperature for 24 hours. RNA was then extracted following the PAXgene procedure including DNase treatment.
Label biotin
Label protocol Approximately 4 µg of total RNA was processed to produce biotinylated cRNA targets.
 
Hybridization protocol standard Affymetrix procedures
Scan protocol standard Affymetrix procedures
Description Whole blood from a patient with progressive supranuclear palsy
Data processing Affymetrix Microarray Suite version 5.0
 
Submission date Dec 26, 2006
Last update date Jan 11, 2007
Contact name Aron C Eklund
Organization name Technical University of Denmark
Department Center for Biological Sequence Analysis
Street address Kemitorvet, Building 208
City Lyngby
ZIP/Postal code 2800
Country Denmark
 
Platform ID GPL96
Series (1)
GSE6613 Parkinson's disease vs. controls, whole blood

Data table header descriptions
ID_REF
VALUE MAS5-calculated Signal intensity

Data table
ID_REF VALUE
AFFX-BioB-5_at 627.2
AFFX-BioB-M_at 2286.2
AFFX-BioB-3_at 797.7
AFFX-BioC-5_at 2530.4
AFFX-BioC-3_at 2173.3
AFFX-BioDn-5_at 1098.4
AFFX-BioDn-3_at 11641.6
AFFX-CreX-5_at 22001.3
AFFX-CreX-3_at 36004.9
AFFX-DapX-5_at 23.7
AFFX-DapX-M_at 94.1
AFFX-DapX-3_at 6.7
AFFX-LysX-5_at 36
AFFX-LysX-M_at 47.3
AFFX-LysX-3_at 4.7
AFFX-PheX-5_at 3.6
AFFX-PheX-M_at 2.3
AFFX-PheX-3_at 93.3
AFFX-ThrX-5_at 2.9
AFFX-ThrX-M_at 2.7

Total number of rows: 22283

Table truncated, full table size 346 Kbytes.




Supplementary file Size Download File type/resource
GSM153504.CEL.gz 3.0 Mb (ftp)(http) CEL

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