|
| Status |
Public on Jun 21, 2007 |
| Title |
e_M45B |
| Sample type |
RNA |
| |
|
| Source name |
human liver; early HCC
|
| Organism |
Homo sapiens |
| Characteristics |
early HCC
|
| Extracted molecule |
total RNA |
| Extraction protocol |
Trizol extraction of total RNA was performed according to the manufacturer's instructions.
|
| Label |
biotin
|
| Label protocol |
Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA
|
| |
|
| Hybridization protocol |
Following fragmentation, 15 ug of cRNA were hybridized according to the standardized protocol from Affymetrix.
|
| Scan protocol |
Affymetrix standard procedure
|
| Description |
early HCC
|
| Data processing |
MAS probe set signal intensity
|
| |
|
| Submission date |
Jan 17, 2007 |
| Last update date |
Aug 28, 2018 |
| Contact name |
Elisa Wurmbach |
| E-mail(s) |
[email protected]
|
| Phone |
212-241-9779
|
| Organization name |
Mount Sinai School of Medicine
|
| Department |
Hematology/Oncology
|
| Lab |
Sam Waxman
|
| Street address |
1 Gustave L. Levy Place
|
| City |
New York |
| State/province |
NY |
| ZIP/Postal code |
10029 |
| Country |
USA |
| |
|
| Platform ID |
GPL570 |
| Series (1) |
| GSE6764 |
Genome-wide molecular profiles of HCV-induced dysplasia and hepatocellular carcinoma |
|
| Relations |
| Reanalyzed by |
GSE64985 |
| Reanalyzed by |
GSE119087 |
