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Sample GSM15689 Query DataSets for GSM15689
Status Public on Jan 27, 2004
Title CurrentSmoker 36
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1509.500 0.000266
1053_at 24.500 0.438361
117_at 55.700 0.284747
121_at 389.200 0.019304
1255_g_at 34.200 0.218983
1294_at 154.000 0.004180
1316_at 97.200 0.035163
1320_at 6.200 0.679170
1405_i_at 27.800 0.487480
1431_at 16.300 0.602006
1438_at 54.600 0.267463
1487_at 183.600 0.098054
1494_f_at 174.800 0.004863
1598_g_at 238.600 0.027860
160020_at 198.000 0.015454
1729_at 181.400 0.000388
1773_at 57.300 0.320830
177_at 36.400 0.267463
179_at 424.200 0.019304
1861_at 123.900 0.027860

Total number of rows: 22215

Table truncated, full table size 586 Kbytes.




Supplementary file Size Download File type/resource
GSM15689.CEL.gz 2.9 Mb (ftp)(http) CEL

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