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Sample GSM15725 Query DataSets for GSM15725
Status Public on Jan 27, 2004
Title NeverSmoker 45
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1667.300 0.000219
1053_at 26.200 0.397994
117_at 85.500 0.127645
121_at 507.700 0.006532
1255_g_at 10.800 0.541184
1294_at 213.000 0.007543
1316_at 120.700 0.017001
1320_at 13.000 0.732537
1405_i_at 74.300 0.023995
1431_at 53.600 0.054470
1438_at 141.300 0.060419
1487_at 216.200 0.031336
1494_f_at 219.200 0.019304
1598_g_at 609.600 0.006532
160020_at 216.100 0.066865
1729_at 177.800 0.003585
1773_at 68.600 0.267463
177_at 72.400 0.031336
179_at 534.700 0.003585
1861_at 100.300 0.189687

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15725.CEL.gz 3.0 Mb (ftp)(http) CEL

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