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Sample GSM15742 Query DataSets for GSM15742
Status Public on Jan 27, 2004
Title FormerSmoker 27
Sample type RNA
 
Source name Bronchial Epithelia
Organism Homo sapiens
Characteristics tissue: Bronchial Epithelium
Extracted molecule total RNA
Extraction protocol RNA was extracted by using TRIzol Reagent (Invitrogen) according to the manufacturer's protocol
Label protocol Affymetrix Suggested Protocol
 
Hybridization protocol Affymetrix Suggested Protocol
Scan protocol Affymetrix Suggested Protocol
Description Volunteer patients underwent bronchoscopy from which RNA was extracted using a commercial RNA extraction kit. Targets were produced using standard Affymetrix procedures from about 8ug of total RNA.
Keywords = Homo Sapiens, bronchial epithelia, molecular screen for smoking related changes to transcript levels in bronchial epithelia
Data processing MAS5.0 Scaled 100 generated expression value
 
Submission date Jan 24, 2004
Last update date Aug 18, 2014
Contact name Avrum Spira
E-mail(s) [email protected]
Phone 617-638-4860
Fax 617-536-8093
URL http://www.pulmonomics.com
Organization name Boston University Medical Center
Department Pulmonary and Critical Care Medicine
Lab Pulmonomics Lab
Street address 715 Albany Street, R304
City Boston
State/province MA
ZIP/Postal code 02118
Country USA
 
Platform ID GPL96
Series (1)
GSE994 Effects of cigarette smoke on the human airway epithelial cell transcriptome
Relations
Reanalyzed by GSE60486

Data table header descriptions
ID_REF Affymetrix Probeset ID
VALUE MAS5.0 Scaled 100 generated expression value
DETECTION P-VALUE P-Value that indicates the significance level of the detection call

Data table
ID_REF VALUE DETECTION P-VALUE
1007_s_at 1627.300 0.000322
1053_at 8.400 0.781017
117_at 38.100 0.715253
121_at 501.800 0.009985
1255_g_at 73.100 0.043968
1294_at 241.300 0.014937
1316_at 117.700 0.081337
1320_at 37.000 0.697453
1405_i_at 60.500 0.388782
1431_at 33.700 0.175989
1438_at 16.000 0.732537
1487_at 124.400 0.250724
1494_f_at 185.600 0.014937
1598_g_at 342.400 0.004863
160020_at 243.700 0.006532
1729_at 366.000 0.000468
1773_at 5.000 0.901946
177_at 92.900 0.162935
179_at 507.900 0.150527
1861_at 85.700 0.267463

Total number of rows: 22215

Table truncated, full table size 587 Kbytes.




Supplementary file Size Download File type/resource
GSM15742.CEL.gz 2.9 Mb (ftp)(http) CEL

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